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A comparative account of microRNA resources, feature-validations and application-based categorizations

dbDEMC- Database of differentially expressed miRNAs

Tool namedbDEMC- Database of differentially expressed miRNAs
URLhttp://159.226.118.44/dbDEMC/index.html
Important featuresWeb-based resource on cancer related microRNAs.
CitationsYang Z, Ren F, Liu C, He S, Sun G, Gao Q, Yao L, Zhang Y, Miao R, Cao Y, Zhao Y, Zhong Y, Zhao H. dbDEMC: a database of differentially expressed miRNAs in human cancers. BMC Genomics. 2010 Dec 2;11 Suppl 4:S5. PubMed PMID: 21143814; PubMed Central PMCID: PMC3005935.
Year of publication2010
Rank by usage frequency100
CommentsDatasets downloadable.
FunctionDISEASE/ TISSUE SPECIFIC, http://159.226.118.44/dbDEMC/index.html, Web-based resource on cancer related microRNAs. , Yang Z- Ren F- Liu C- He S- Sun G- Gao Q- Yao L- Zhang Y- Miao R- Cao Y- Zhao Y- Zhong Y- Zhao H. dbDEMC: a database of differentially expressed miRNAs in human cancers. BMC Genomics. 2010 Dec 2;11 Suppl 4:S5. PubMed PMID: 21143814; PubMed Central PMCID: PMC3005935. , 2010, 100, Datasets downloadable. , Online, I. SPECIES SUPPORTED INCLUDE: human II. QUERY OR INPUT DATA: 1. Search database by miRNA ID or miRBase accession number 2. Browse miRNAs in Cancer (select from given list) 3. BLAST: Enter sequence in FASTA format III. OUTPUT DATA: Details on expression status of the given microRNA- expression heat map etc. IV. ADDITIONAL INFORMATION: The current version is supposed to hold data curated from published literature on " 607 differentially expressed microRNAS (590 mature microRNAs and 17 precursor microRNAs) in 14 cancers- from 48 microarray experiments.", Develop microRNA bioinformatic tools with the help of a programming interface.
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